title: "Meta-analysis of genes"
  subtitle: "Draft, 25-05-2025v6c"
  output:
    html_document:
      toc: true
      toc_float:
        collapsed: false
        smooth_scroll: false
      code_folding: hide
      number_sections: false
      theme: spacelab
  ---
  # MA_HC_Astrocitos_FM {- .tabset .tabset-fade .tabset-pills}
  
  
  ```r
  library(dplyr)
  library(knitr)
  library(DT)
  load("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/MA_HC_Astrocitos_FM.RData")
  ```

ENSG00000008226

Statistics of ENSG00000008226 meta-analisys

kable(sig.genes.df['ENSG00000008226',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000008226 DLEC1 -1.456413 -1.275382 -1.094351 0 2435.702 0 0.0923645 0.0189902 99.91789 1217.851 0 0 39.76525 3 2 Study43,GSE163577,syn52293442_hc 0.2994023 Study43,GSE163577,syn52293442_hc

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000008226_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000008226_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000008226_INFLUENCE.png")

ENSG00000077327

Statistics of ENSG00000077327 meta-analisys

kable(sig.genes.df['ENSG00000077327',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000077327 SPAG6 -1.254338 -1.144909 -1.035481 0 9590.838 0 0.0558321 0.0065552 99.97915 4795.419 0 0 89.5905 3 2 Study43,GSE163577,syn52293442_hc 0.2301686 Study43,GSE163577,syn52293442_hc

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000077327_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000077327_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000077327_INFLUENCE.png")

ENSG00000095637

Statistics of ENSG00000095637 meta-analisys

kable(sig.genes.df['ENSG00000095637',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000095637 SORBS1 0.8139587 0.9057628 0.9975668 0 1.122131 0.5706008 0.0468397 0 0 1 0 0 79.4942 3 3 GSE163577 0.592888 all.p.values < 0.05

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000095637_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000095637_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000095637_INFLUENCE.png")

ENSG00000112319

Statistics of ENSG00000112319 meta-analisys

kable(sig.genes.df['ENSG00000112319',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000112319 EYA4 -3.597182 -3.38087 -3.164558 0 10043.15 0 0.1103655 0.0315218 99.98009 5021.573 0 0 201.7012 3 2 Study43,GSE163577,syn52293442_hc 0.5896181 Study43,GSE163577,syn52293442_hc

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000112319_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000112319_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000112319_INFLUENCE.png")

ENSG00000112539

Statistics of ENSG00000112539 meta-analisys

kable(sig.genes.df['ENSG00000112539',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000112539 C6orf118 -5.99796 -5.240023 -4.482086 0 6825.43 0 0.3867097 0.4356175 99.9707 3412.715 0 0 38.27099 3 2 Study43,GSE163577,syn52293442_hc 0.9163223 Study43,GSE163577,syn52293442_hc

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000112539_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000112539_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000112539_INFLUENCE.png")

ENSG00000122735

Statistics of ENSG00000122735 meta-analisys

kable(sig.genes.df['ENSG00000122735',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000122735 DNAI1 -7.976469 -7.578922 -7.181375 0 29553.68 0 0.2028339 0.1168478 99.99323 14776.84 0 0 300.7094 3 2 Study43,GSE163577,syn52293442_hc 0.8428961 Study43,GSE163577,syn52293442_hc

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000122735_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000122735_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000122735_INFLUENCE.png")

ENSG00000137098

Statistics of ENSG00000137098 meta-analisys

kable(sig.genes.df['ENSG00000137098',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000137098 SPAG8 -2.330851 -2.080992 -1.831133 0 3012.989 0 0.1274816 0.0371117 99.93362 1506.495 0 0 56.18879 3 2 Study43,GSE163577,syn52293442_hc 0.3368023 Study43,GSE163577,syn52293442_hc

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000137098_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000137098_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000137098_INFLUENCE.png")

ENSG00000137473

Statistics of ENSG00000137473 meta-analisys

kable(sig.genes.df['ENSG00000137473',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000137473 TTC29 -6.663464 -5.991522 -5.319581 0 18888.54 0 0.3428337 0.3466716 99.98941 9444.269 0 0 64.64572 3 2 Study43,GSE163577,syn52293442_hc 0.9518189 Study43,GSE163577,syn52293442_hc

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000137473_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000137473_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000137473_INFLUENCE.png")

ENSG00000139865

Statistics of ENSG00000139865 meta-analisys

kable(sig.genes.df['ENSG00000139865',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000139865 TTC6 -5.502408 -5.205712 -4.909016 0 15065.61 0 0.1513781 0.0617658 99.98672 7532.806 0 0 254.5993 3 2 Study43,GSE163577,syn52293442_hc 0.6957715 Study43,GSE163577,syn52293442_hc

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000139865_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000139865_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000139865_INFLUENCE.png")

ENSG00000142621

Statistics of ENSG00000142621 meta-analisys

kable(sig.genes.df['ENSG00000142621',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000142621 FHAD1 -6.157032 -5.447065 -4.737097 0 10688.58 0 0.3622351 0.3848411 99.98129 5344.291 0 0 47.42236 3 2 Study43,GSE163577,syn52293442_hc 0.9357641 Study43,GSE163577,syn52293442_hc

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000142621_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000142621_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000142621_INFLUENCE.png")

ENSG00000149927

Statistics of ENSG00000149927 meta-analisys

kable(sig.genes.df['ENSG00000149927',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000149927 DOC2A -2.138408 -1.87501 -1.611613 0 2228.02 0 0.1343891 0.0410871 99.91023 1114.01 0 0 40.61269 3 2 Study43,GSE163577,syn52293442_hc 0.3311095 Study43,GSE163577,syn52293442_hc

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000149927_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000149927_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000149927_INFLUENCE.png")

ENSG00000154099

Statistics of ENSG00000154099 meta-analisys

kable(sig.genes.df['ENSG00000154099',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000154099 DNAAF1 -5.93459 -5.53098 -5.12737 0 23552.23 0 0.2059272 0.1230304 99.99151 11776.11 0 0 154.7441 3 1 Study43,GSE163577,syn52293442_hc 0.9042753 Study43,GSE163577,syn52293442_hc

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000154099_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000154099_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000154099_INFLUENCE.png")

ENSG00000158486

Statistics of ENSG00000158486 meta-analisys

kable(sig.genes.df['ENSG00000158486',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000158486 DNAH3 -1.465881 -1.343438 -1.220995 0 6742.042 0 0.0624721 0.0085221 99.97034 3371.021 0 0 98.67245 3 1 Study43,GSE163577,syn52293442_hc 0.2736191 Study43,GSE163577,syn52293442_hc

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000158486_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000158486_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000158486_INFLUENCE.png")

ENSG00000160188

Statistics of ENSG00000160188 meta-analisys

kable(sig.genes.df['ENSG00000160188',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000160188 RSPH1 -7.092758 -6.533973 -5.975189 0 15922.73 0 0.2850995 0.2351269 99.98744 7961.366 0 0 112.2849 3 2 Study43,GSE163577,syn52293442_hc 0.8959406 Study43,GSE163577,syn52293442_hc

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000160188_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000160188_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000160188_INFLUENCE.png")

ENSG00000163491

Statistics of ENSG00000163491 meta-analisys

kable(sig.genes.df['ENSG00000163491',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000163491 NEK10 -4.882345 -4.501065 -4.119785 0 20276.52 0 0.1945343 0.110343 99.99014 10138.26 0 0 114.4254 3 2 Study43,GSE163577,syn52293442_hc 0.9188066 Study43,GSE163577,syn52293442_hc

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000163491_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000163491_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000163491_INFLUENCE.png")

ENSG00000167858

Statistics of ENSG00000167858 meta-analisys

kable(sig.genes.df['ENSG00000167858',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000167858 TEKT1 -2.740393 -2.422189 -2.103985 0 4745.735 0 0.1623521 0.0748436 99.95786 2372.868 0 0 46.67929 3 2 Study43,GSE163577,syn52293442_hc 0.8428589 Study43,GSE163577,syn52293442_hc

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000167858_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000167858_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000167858_INFLUENCE.png")

ENSG00000171962

Statistics of ENSG00000171962 meta-analisys

kable(sig.genes.df['ENSG00000171962',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000171962 DRC3 -7.730111 -7.158775 -6.587439 0 12098.1 0 0.2915033 0.2404268 99.98347 6049.051 0 0 129.0962 3 2 Study43,GSE163577,syn52293442_hc 0.8321641 Study43,GSE163577,syn52293442_hc

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000171962_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000171962_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000171962_INFLUENCE.png")

ENSG00000176601

Statistics of ENSG00000176601 meta-analisys

kable(sig.genes.df['ENSG00000176601',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000176601 MAP3K19 -6.65708 -6.030891 -5.404702 0 7900.097 0 0.3194901 0.2906209 99.97468 3950.048 0 0 75.69692 3 2 Study43,GSE163577,syn52293442_hc 0.8503317 Study43,GSE163577,syn52293442_hc

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000176601_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000176601_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000176601_INFLUENCE.png")

ENSG00000182329

Statistics of ENSG00000182329 meta-analisys

kable(sig.genes.df['ENSG00000182329',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000182329 KIAA2012 -8.04583 -7.033873 -6.021916 0 20271.7 0 0.516314 0.7922147 99.99013 10135.85 0 0 38.6816 3 2 Study43,GSE163577,syn52293442_hc 0.9732881 Study43,GSE163577,syn52293442_hc

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000182329_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000182329_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000182329_INFLUENCE.png")

ENSG00000197057

Statistics of ENSG00000197057 meta-analisys

kable(sig.genes.df['ENSG00000197057',])
SYMBOL lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr p.adjust.BY logFDR n.studies infl.same.sign.logFC infl.nstudies sensi.global sensi.specific
ENSG00000197057 DTHD1 -3.331806 -3.123039 -2.914271 0 10729.63 0 0.106516 0.0304699 99.98136 5364.814 0 0 184.7072 3 2 Study43,GSE163577,syn52293442_hc 0.6859789 Study43,GSE163577,syn52293442_hc

Gene information

Forest plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000197057_FOREST.png")

Funnel plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000197057_FUNNEL.png")

Incluence plot

knitr::include_graphics("/clinicfs/projects/i63/tfm_hipocampo/Metaanalysis_HC/HC/Astrocitos/FM/plots/ENSG00000197057_INFLUENCE.png")

sessionInfo

date()
## [1] "Sun May 25 15:47:58 2025"
sessionInfo()
## R version 4.2.2 (2022-10-31)
## Platform: x86_64-pc-linux-gnu (64-bit)
## Running under: CentOS Linux 7 (Core)
## 
## Matrix products: default
## BLAS/LAPACK: /opt/sci-soft/software/FlexiBLAS/3.0.4-GCC-11.2.0/lib64/libflexiblas.so.3.0
## 
## locale:
##  [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C               LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
##  [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8    LC_PAPER=en_US.UTF-8       LC_NAME=C                 
##  [9] LC_ADDRESS=C               LC_TELEPHONE=C             LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       
## 
## attached base packages:
## [1] stats     graphics  grDevices utils     datasets  methods   base     
## 
## other attached packages:
##  [1] plotly_4.10.4       DT_0.26             knitr_1.41          ggplot2_3.5.2       dplyr_1.0.10        limma_3.54.0       
##  [7] tibble_3.1.8        metafor_3.8-1       metadat_1.2-0       Matrix_1.5-3        Biobase_2.58.0      BiocGenerics_0.44.0
## 
## loaded via a namespace (and not attached):
##  [1] tidyselect_1.2.0   xfun_0.35          bslib_0.4.2        purrr_0.3.5        lattice_0.20-45    vctrs_0.6.5       
##  [7] generics_0.1.3     htmltools_0.5.4    viridisLite_0.4.1  yaml_2.3.6         utf8_1.2.2         rlang_1.1.6       
## [13] pillar_1.8.1       jquerylib_0.1.4    glue_1.6.2         withr_2.5.0        DBI_1.1.3          RColorBrewer_1.1-3
## [19] lifecycle_1.0.3    stringr_1.5.0      gtable_0.3.1       htmlwidgets_1.6.0  evaluate_0.19      labeling_0.4.2    
## [25] fastmap_1.1.0      crosstalk_1.2.0    fansi_1.0.3        highr_0.9          scales_1.4.0       cachem_1.0.6      
## [31] jsonlite_1.8.4     farver_2.1.1       png_0.1-8          digest_0.6.31      stringi_1.7.8      grid_4.2.2        
## [37] mathjaxr_1.6-0     cli_3.4.1          tools_4.2.2        magrittr_2.0.3     sass_0.4.4         lazyeval_0.2.2    
## [43] dichromat_2.0-0.1  tidyr_1.2.1        pkgconfig_2.0.3    ellipsis_0.3.2     data.table_1.14.6  assertthat_0.2.1  
## [49] rmarkdown_2.19     httr_1.4.4         rstudioapi_0.14    R6_2.5.1           nlme_3.1-161       compiler_4.2.2